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Daylily Informatics

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Effects Of Altering bwa kmer Sizes On SNV Calling

with bwa mem2 meme

Posted on May 8, 2023

An experiment looking into the effects on mapping statistics and SNV calling with bwa kmer -k sizes 16-23. [Read More]
Tags:
- bioinformatics
- unix
- genomics
- bwa
- mapping
- SNV Calling
fastq To SNVvcf 30x WGS Analysis in < 1hr & Costing from $3.32\^1-$8.54

The beginning of the Daylily Informatics Blog.

Posted on May 8, 2023

Introducing The Daylily Multi-Omic Analysis Framework: 30x WGS Pipelines Running < 1hr, for dollars a sample & achieving Fscores of up to 0.998. [Read More]
Tags:
The Journey To A $1.89 30x fastq-to-sorted.bam.bai in 34 min.

The beginning of the Daylily Informatics Blog.

Posted on May 3, 2023

I would like to share a combination of techniques which produce an aligned+sorted+indexed bam in 34m for $1.89 [Read More]
Tags: